tencent cloud

Feedback

Run an Analysis Workflow

Last updated: 2024-10-22 15:26:45
    The common usage process of Tencent Omics Platform is shown in the diagram below:
    
    
    
    Step 1: Apply for the Tencent HealthCare Omics Platform Service
    Register and apply for a Tencent Cloud account and fill in Tencent HealthCare Omics Platform activation application to apply for a Tencent HealthCare Omics Platform account.

    Step 2: Create Environment/User/User Group in Console

    Create an environment in Tencent Cloud Console - Tencent HealthCare Omics Platform module, configure the storage, computing, and other environmental resources of the underlying cluster (such as Tencent Kubernetes Engine TKE Serverless, CFS, and CVM) with one click. After the environment is created, create user/user group accounts as needed to log in to Tencent HealthCare Omics Platform website.

    Step 3: Upload Data

    Create a Tencent COS bucket. The omics platform supports Beijing, Shanghai, and Guangzhou. It is recommended that a bucket be created in the region closest to the mentioned above. The analysis data is uploaded by the user to the COS bucket he built. For specific operations, see File Management.

    Step 4: Upload Tool Image (Optional)

    Initialize Tencent Cloud TCR and push the tool image. For details, see How to Upload Docker Images to Tencent Container Registry (TCR)?

    Step 5: Create a Project and Bind the Environment/Bucket

    After successfully creating the environment and completing the resource configuration in the console, you can log in to Tencent HealthCare Omics Platform website to officially run an analysis workflow.
    First, you can create project based on the business type and bind the environment and the bucket you need to use.

    Step 6: Assign Role Permissions

    The platform supports project-centered role-based permission management and allows managers to assign project permissions to users in the console. It also supports project owners to assign role permissions in project settings. For specific operations, see Permission Management.

    Step 7: Upload Tables

    For batch task submission scenes, you need to upload a table. Create a table template and upload the table after its generation. It also supports uploading existing csv format tables. For specific operations, see Table Management.

    Step 8: Create a New Application

    Create a WDL application. The online editor supports editing, and batch local uploads are also available. You can manage application versions and publish official versions. For detailed operations, see Application Editing (Code Editing).

    Step 9: Submit and run the Workflow

    After the user completes the application task settings and parameter settings, the running is submitted, and the platform will automatically perform verification and run.

    Step 10: View Running

    Check the running status and completion progress through the running group list and details page.

    Step 11: Obtain Results

    After the running is completed, the analysis results are automatically archived in the specified directory in the COS bucket. Users can directly download and view the analysis results in COS.
    Contact Us

    Contact our sales team or business advisors to help your business.

    Technical Support

    Open a ticket if you're looking for further assistance. Our Ticket is 7x24 avaliable.

    7x24 Phone Support